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Innovative, Translational, and User-Friendly Tools for Comprehensive Statistical Model Evaluation

NCER
Program: Statistical and Research Methodology in Education
Program topic(s): Core
Award amount: $900,000
Principal investigator: Wesley Bonifay
Awardee:
University of Missouri, Columbia
Year: 2021
Award period: 4 years 3 months (06/01/2021 - 08/31/2025)
Project type:
Methodological Innovation
Award number: R305D210032

Purpose

A key component of any scientific undertaking is the construction of a model that explains the data. No model is an exact representation of the phenomena under investigation and, especially in the education sciences, useful models are often simplistic approximations of immensely complex processes. Goodness-of-fit (GOF) assessment provides a limited view of a model's usefulness. While GOF addresses the closeness of the model to the observed data, generalizability measures the potential fit of a model to unseen data samples that have been or will be generated by the same underlying processes that produced the observed data. To make model-based inferences more informative, defensible, and replicable, applied education researchers should contextualize GOF by also quantifying the generalizability and complexity of their models.

Project Activities

The project team addressed this by first developing the theoretical basis for a software package by combining Bayesian, classical, and information-theoretic perspectives into a unified approach to statistical modeling. Then, after extensive Monte Carlo simulations to generate and test the unified approach, they developed a user-friendly R package for CoSME (comprehensive statistical model evaluation).

Key outcomes

The main findings of this project are as follows:  

  • Goodness-of-fit testing is the primary method of model evaluation in statistical modeling in education research, but provides limited scientific value (Bonifay, 2022; Bonifay & Depaoli, 2023; Bonifay et al., 2024; Bonifay et al., 2025; Cai, 2025).
  • Alternative methods like Bayesian predictive model checking are much more insightful, especially in the context of evaluating item response theory models and replicating factor model-based research (Bonifay & Depaoli, 2023; Bonifay et al., 2024; Winter et al., 2025).
  • Some models have an inherent tendency to fit better than other models to any possible data set, including, for example, the highly popular p-factor model of general psychopathology (Bonifay, 2022; Bonifay et al., 2025; Suh et al., 2025; Watts et al., 2023).
  • The information-theoretic principle of minimum description length is especially useful for evaluating statistical models, as it quantifies the evidential value of good fit (Bonifay, 2022; Bonifay et al, 2025; Suh et al., 2025).

People and institutions involved

Project contributors

Li Cai

Co-principal investigator

Products and publications

Publications:

Bonifay, W. (2022). Increasing generalizability via the principle of minimum description length. Behavioral and Brain Sciences, 45, Article E5 2022 

Bonifay, W., Cai, L., Falk, C. F., & Preacher, K. J. (2025). Reassessing the fitting propensity of factor models. Psychological Methods.

Bonifay, W., & Depaoli, S. (2023). Model evaluation in the presence of categorical data: Bayesian model checking as an alternative to traditional methods. Prevention Science, 24(3), 467-479.

Bonifay, W., Winter, S. D., Skoblow, H. F., & Watts, A. L. (2024). Good fit is weak evidence of replication: increasing rigor through prior predictive similarity checking. Assessment, 10731911241234118.

Cai, L. Hansen, M., Jeon, M., & Edwards, M. C. (2025). Modeling data from educational assessments. In L. L. Cook & M. J. Pitoniak (Eds.), Educational Measurement (5th Ed.) (pp. 682-760). Oxford, UK: Oxford University Press

Davis-Stober, C. P., Dana, J., Kellen, D., McMullin, S. D., & Bonifay, W. (2024). Better accuracy for better science... through random conclusions. Perspectives on Psychological Science, 19(1), 223-243.

Feng, T., & Cai, L. (2026). Sensemaking of process data from evaluation studies of educational games: An application of cross‐classified item response theory modeling. Journal of Educational Measurement, 63(1), e12396.

Watts, A.L., Greene, A.L., Bonifay, W. et al. (2024). A critical evaluation of the p-factor literature. Nature Reviews Psychology, 3, 108-122.

Winter, S. D., Eddy, C. L., Yang, W., & Bonifay, W. (2025). A tutorial on Bayesian item response theory: An illustration using the Teacher Stress Inventory-Short Form. Journal of School Psychology, 109, 101427.

Questions about this project?

To answer additional questions about this project or provide feedback, please contact the program officer.

 

Tags

Data and Assessments

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Questions about this project?

To answer additional questions about this project or provide feedback, please contact the program officer.

 

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